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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
97
ChIP-seq
4
DNase-seq
4
WGBS
1
ATAC-seq
1
RRBS
Assay category
97
DNA binding
5
DNA accessibility
5
DNA methylation
Target of assay
53
transcription factor
33
histone modification
32
histone
19
RNA binding protein
19
broad histone mark
16
recombinant protein
13
narrow histone mark
11
control
5
chromatin remodeller
Date released
315
November, 2017
194
May, 2020
63
December, 2017
54
August, 2017
53
November, 2018
40
May, 2022
35
August, 2021
10
July, 2019
7
October, 2019
5
December, 2019
5
January, 2019
3
February, 2021
3
March, 2020
2
June, 2019
1
December, 2018
1
February, 2020
Available data
81
fastq
79
bam
70
bigWig
69
bed narrowPeak
57
bigBed narrowPeak
20
tagAlign
6
bed bed3+
3
bed broadPeak
3
bigBed broadPeak
2
bed bedMethyl
2
bigBed bedMethyl
Organism
107
Homo sapiens
Biosample type
61
tissue
46
cell line
Organ
195
pancreas
126
connective tissue
107
liver
58
adipose tissue
29
epithelium
26
musculature of body
15
blood
15
bodily fluid
9
spleen
2
brain
Project
107
AMP
Genome assembly (visualization)
71
GRCh38
69
hg19
Lab
107
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
6
inconsistent control read length
4
inconsistent control run_type
BIOSAMPLE
ASSAY
107 results
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Clear Filters
ChIP-seq
DNase-seq
WGBS
ATAC-seq
RRBS
tissue
liver
52
2
3
1
right lobe of liver
2
1
cell line
HepG2
45
1
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