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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
39
ChIP-seq
4
ATAC-seq
1
Hi-C
1
total RNA-seq
Assay category
39
DNA binding
4
DNA accessibility
1
3D chromatin structure
1
Transcription
Target of assay
24
histone
24
histone modification
14
control
12
broad histone mark
12
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
80
May, 2022
61
September, 2018
52
February, 2023
35
October, 2019
33
April, 2018
33
July, 2018
32
February, 2021
29
August, 2017
26
May, 2021
20
June, 2019
19
December, 2017
19
September, 2020
16
November, 2019
13
July, 2019
7
August, 2020
6
August, 2021
6
December, 2019
6
March, 2020
6
November, 2017
6
November, 2020
5
May, 2019
5
September, 2017
3
August, 2018
3
October, 2022
2
October, 2018
1
June, 2018
Available data
44
bam
29
bed narrowPeak
29
bigWig
29
fastq
3
bigBed narrowPeak
1
bedpe bed3+
1
hic
1
tsv
Organism
45
Homo sapiens
Biosample type
29
primary cell
16
cell line
Organ
243
pancreas
126
connective tissue
58
adipose tissue
54
liver
45
epithelium
26
musculature of body
Project
45
AMP
Genome assembly (visualization)
31
hg19
30
GRCh38
Lab
45
AMP-T2D consortium
Audit category:
16
inconsistent ontology term
Audit category:
4
inconsistent control read length
BIOSAMPLE
ASSAY
45 results
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Clear Filters
ChIP-seq
ATAC-seq
Hi-C
total RNA-seq
primary cell
pancreatic alpha cell
13
1
pancreatic beta cell
13
1
pancreatic acinar cell
1
cell line
EndoC_BH1
13
1
1
1
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