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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
211
ChIP-seq
Assay category
211
DNA binding
Target of assay
211
histone modification
210
histone
119
broad histone mark
90
narrow histone mark
53
control
47
transcription factor
8
RNA binding protein
3
chromatin remodeller
Date released
199
August, 2017
196
October, 2019
140
May, 2021
92
May, 2019
88
November, 2017
60
April, 2019
32
September, 2018
31
December, 2017
30
October, 2018
27
May, 2020
20
August, 2021
19
June, 2019
16
February, 2018
12
October, 2017
10
November, 2019
7
January, 2019
3
March, 2020
Available data
129
bigWig
114
bed narrowPeak
110
fastq
109
bam
86
tagAlign
40
bed broadPeak
36
bigBed narrowPeak
12
bed bed3+
11
bigBed broadPeak
Organism
205
Homo sapiens
Biosample type
136
tissue
38
primary cell
37
in vitro differentiated cells
Organ
69
connective tissue
66
pancreas
33
liver
32
adipose tissue
19
musculature of body
14
epithelium
12
brain
Project
211
AMP
Genome assembly (visualization)
129
hg19
109
GRCh38
Lab
211
AMP-T2D consortium
Audit category:
20
missing controlled_by
Audit category:
10
inconsistent control read length
3
inconsistent assembly
1
inconsistent control run_type
BIOSAMPLE
ASSAY
211 results
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Clear Filters
ChIP-seq
tissue
liver
33
subcutaneous abdominal adipose tissue
31
islet of Langerhans
28
skeletal muscle tissue
19
brain
12
+ See 2 more…
primary cell
pancreatic endocrine cell
12
skeletal muscle myoblast
12
pancreatic alpha cell
7
pancreatic beta cell
7
in vitro differentiated cells
adipocyte
37
See all biosamples
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