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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
41
ChIP-seq
8
DNase-seq
Assay category
41
DNA binding
8
DNA accessibility
Target of assay
39
histone
39
histone modification
24
broad histone mark
15
narrow histone mark
2
RNA binding protein
2
transcription factor
1
chromatin remodeller
Date released
187
June, 2019
41
August, 2017
12
November, 2017
9
November, 2018
8
October, 2019
4
October, 2017
1
March, 2019
1
November, 2020
Available data
503
bam
459
bigWig
316
bed narrowPeak
287
fastq
134
tagAlign
104
bigBed narrowPeak
101
tsv
49
bed broadPeak
39
bed bed3+
23
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
4
hic
3
bedpe bed3+
1
tagAlign bed3+
1
tar
Organism
43
Homo sapiens
Biosample type
30
tissue
18
primary cell
cell line
1
in vitro differentiated cells
Organ
13
musculature of body
12
pancreas
6
blood vessel
6
vasculature
4
epithelium
4
limb
4
vein
2
artery
2
connective tissue
2
nerve
1
adipose tissue
Project
49
AMP
Genome assembly (visualization)
49
hg19
25
GRCh38
Lab
49
AMP-T2D consortium
Audit category:
2
inconsistent assembly
biosample_type!
cell line
BIOSAMPLE
ASSAY
49 results
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ChIP-seq
DNase-seq
tissue
skeletal muscle tissue
13
islet of Langerhans
6
pancreas
6
tibial artery
2
tibial nerve
2
+ See 1 more…
primary cell
skeletal muscle myoblast
13
1
endothelial cell of umbilical vein
2
2
in vitro differentiated cells
adipocyte
1
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