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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
94
ChIP-seq
89
total RNA-seq
6
ATAC-seq
1
DNase-seq
1
FAIRE-seq
Assay category
94
DNA binding
89
Transcription
8
DNA accessibility
Target of assay
66
histone
66
histone modification
34
narrow histone mark
32
broad histone mark
21
control
7
transcription factor
2
RNA binding protein
Date released
188
August, 2017
157
July, 2018
104
May, 2022
72
September, 2018
55
February, 2023
53
October, 2018
40
May, 2021
39
April, 2018
39
November, 2019
19
September, 2020
11
September, 2017
9
March, 2020
8
January, 2021
7
August, 2020
7
November, 2018
6
February, 2021
6
July, 2019
5
March, 2019
5
October, 2017
4
June, 2019
4
November, 2020
3
August, 2018
3
October, 2019
3
October, 2022
2
August, 2021
2
May, 2019
1
August, 2022
1
February, 2020
1
June, 2018
Available data
168
bam
168
fastq
159
bigWig
89
tsv
49
bed narrowPeak
19
bed bed3+
17
bigBed narrowPeak
16
tagAlign
12
bed broadPeak
Organism
184
Homo sapiens
Biosample type
150
tissue
41
primary cell
cell line
Organ
191
pancreas
129
connective tissue
86
brain
69
limb
62
epithelium
61
liver
58
adipose tissue
47
blood vessel
47
vasculature
42
nerve
26
artery
26
musculature of body
21
eye
21
vein
15
kidney
8
heart
4
gonad
4
ovary
2
pituitary gland
1
lymph node
1
skin of body
Project
191
AMP
Genome assembly (visualization)
159
hg19
152
GRCh38
Lab
191
AMP-T2D consortium
Audit category:
22
missing controlled_by
Audit category:
8
inconsistent control read length
1
inconsistent assembly
biosample_type!
cell line
BIOSAMPLE
ASSAY
191 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
DNase-seq
FAIRE-seq
tissue
islet of Langerhans
42
89
3
1
1
pancreas
14
primary cell
pancreatic alpha cell
13
1
pancreatic beta cell
13
1
pancreatic endocrine cell
12
pancreatic acinar cell
1
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