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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
ChIP-seq
9
DNase-seq
Assay category
15
DNA binding
9
DNA accessibility
Target of assay
13
histone
13
histone modification
8
broad histone mark
5
narrow histone mark
2
RNA binding protein
2
transcription factor
1
chromatin remodeller
Date released
187
June, 2019
64
November, 2017
15
August, 2017
9
November, 2018
9
October, 2019
1
November, 2020
Available data
532
bam
479
bigWig
331
bed narrowPeak
287
fastq
134
tagAlign
112
bigBed narrowPeak
105
tsv
50
bed broadPeak
41
bed bed3+
24
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
4
hic
3
bedpe bed3+
1
hdf5
1
tagAlign bed3+
1
tar
Organism
24
Homo sapiens
Biosample type
18
primary cell
4
tissue
1
cell line
1
in vitro differentiated cells
Organ
6
blood vessel
6
vasculature
4
epithelium
4
limb
4
vein
2
artery
2
nerve
1
connective tissue
1
pancreas
Project
24
AMP
Genome assembly (visualization)
24
hg19
20
GRCh38
Lab
24
AMP-T2D consortium
Audit category:
1
inconsistent assembly
BIOSAMPLE
ASSAY
24 results
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ChIP-seq
DNase-seq
primary cell
skeletal muscle myoblast
13
1
endothelial cell of umbilical vein
2
2
tissue
tibial artery
2
tibial nerve
2
cell line
Panc1
1
in vitro differentiated cells
adipocyte
1
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