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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
53
ChIP-seq
3
WGBS
2
ATAC-seq
1
DNase-seq
1
RRBS
1
total RNA-seq
Assay category
53
DNA binding
4
DNA methylation
3
DNA accessibility
1
Transcription
Target of assay
38
histone modification
37
histone
22
broad histone mark
15
narrow histone mark
11
control
4
transcription factor
Date released
315
November, 2017
194
May, 2020
63
December, 2017
54
August, 2017
53
November, 2018
40
May, 2022
35
August, 2021
10
July, 2019
7
October, 2019
5
December, 2019
5
January, 2019
3
February, 2021
3
March, 2020
2
June, 2019
1
December, 2018
1
February, 2020
Available data
33
bam
28
fastq
24
bed narrowPeak
24
bigWig
20
tagAlign
6
bigBed narrowPeak
3
bed bed3+
1
bed bedMethyl
1
bigBed bedMethyl
1
tsv
Organism
61
Homo sapiens
Biosample type
60
tissue
1
primary cell
Organ
206
pancreas
129
connective tissue
86
brain
69
limb
64
epithelium
61
liver
58
adipose tissue
47
blood vessel
47
vasculature
42
nerve
30
kidney
26
artery
26
musculature of body
21
eye
21
vein
8
heart
4
gonad
4
ovary
2
pituitary gland
1
lymph node
skin of body
Project
61
AMP
Genome assembly (visualization)
27
hg19
26
GRCh38
Lab
61
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
1
inconsistent control read length
organ_slims!
skin of body
BIOSAMPLE
ASSAY
61 results
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Clear Filters
ChIP-seq
WGBS
ATAC-seq
DNase-seq
RRBS
total RNA-seq
tissue
liver
53
3
1
1
right lobe of liver
1
1
primary cell
Liver fetal (hepatocyte)
1
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