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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
80
ChIP-seq
Assay category
80
DNA binding
Target of assay
185
histone modification
184
histone
103
broad histone mark
80
narrow histone mark
47
transcription factor
38
control
8
RNA binding protein
3
chromatin remodeller
Date released
132
October, 2019
80
August, 2017
62
May, 2021
36
November, 2017
33
May, 2019
27
May, 2020
23
April, 2019
15
May, 2024
11
October, 2018
9
August, 2021
9
December, 2017
9
June, 2019
8
February, 2018
4
September, 2018
3
January, 2019
2
March, 2020
2
October, 2017
Available data
52
bigWig
44
bam
44
fastq
42
bed narrowPeak
29
tagAlign
15
bed broadPeak
12
bigBed narrowPeak
6
bed bed3+
5
bigBed broadPeak
Organism
78
Homo sapiens
Biosample type
50
tissue
16
in vitro differentiated cells
14
primary cell
Organ
34
pancreas
28
connective tissue
13
liver
12
adipose tissue
epithelium
7
musculature of body
Project
80
AMP
Genome assembly (visualization)
52
hg19
44
GRCh38
Lab
80
AMP-T2D consortium
Audit category:
11
missing controlled_by
Audit category:
3
inconsistent control read length
1
inconsistent assembly
1
inconsistent control run_type
organ_slims!
epithelium
BIOSAMPLE
ASSAY
80 results
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ChIP-seq
tissue
islet of Langerhans
14
liver
13
subcutaneous abdominal adipose tissue
11
skeletal muscle tissue
7
pancreas
4
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in vitro differentiated cells
adipocyte
16
primary cell
pancreatic endocrine cell
8
skeletal muscle myoblast
6
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