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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
89
total RNA-seq
9
WGBS
6
RRBS
5
DNase-seq
2
ATAC-seq
1
FAIRE-seq
Assay category
89
Transcription
15
DNA methylation
8
DNA accessibility
Date released
675
February, 2021
291
May, 2020
274
August, 2021
212
May, 2021
173
June, 2019
153
February, 2023
135
July, 2018
120
May, 2022
112
August, 2017
95
July, 2019
61
October, 2019
56
March, 2020
47
September, 2023
45
November, 2019
40
September, 2020
25
February, 2020
19
April, 2020
18
November, 2018
16
April, 2018
16
January, 2021
15
February, 2018
15
May, 2023
10
November, 2020
8
January, 2018
8
October, 2017
5
January, 2019
5
March, 2019
5
March, 2023
4
December, 2019
2
June, 2018
1
August, 2018
1
August, 2022
1
December, 2018
1
October, 2022
1
September, 2018
Available data
103
fastq
98
bam
98
bigWig
89
tsv
7
bed narrowPeak
7
bigBed narrowPeak
6
bed bedMethyl
6
bigBed bedMethyl
2
bed broadPeak
2
bigBed broadPeak
Organism
112
Homo sapiens
Biosample type
108
tissue
3
primary cell
1
in vitro differentiated cells
Organ
94
pancreas
8
connective tissue
7
adipose tissue
6
liver
4
musculature of body
epithelium
Project
112
AMP
Genome assembly (visualization)
100
hg19
95
GRCh38
Lab
112
AMP-T2D consortium
organ_slims!
epithelium
target.investigated_as!
broad histone mark
assay_title!
ChIP-seq
BIOSAMPLE
ASSAY
112 results
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Clear Filters
total RNA-seq
WGBS
RRBS
DNase-seq
ATAC-seq
FAIRE-seq
tissue
islet of Langerhans
89
1
1
liver
3
1
skeletal muscle tissue
4
adipose tissue
3
subcutaneous abdominal adipose tissue
3
+ See 2 more…
primary cell
skeletal muscle myoblast
1
2
in vitro differentiated cells
adipocyte
1
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