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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
113
ChIP-seq
Assay category
113
DNA binding
Target of assay
197
histone modification
196
histone
113
broad histone mark
82
narrow histone mark
47
transcription factor
41
control
8
RNA binding protein
3
chromatin remodeller
Date released
103
August, 2017
76
May, 2021
56
May, 2019
50
November, 2017
43
October, 2019
37
April, 2019
20
May, 2024
19
October, 2018
10
October, 2017
8
August, 2021
8
December, 2017
8
February, 2018
8
June, 2019
7
September, 2018
4
January, 2019
Available data
60
bigWig
55
bed narrowPeak
55
tagAlign
49
fastq
48
bam
24
bed broadPeak
23
bigBed narrowPeak
6
bed bed3+
6
bigBed broadPeak
Organism
109
Homo sapiens
Biosample type
83
tissue
20
in vitro differentiated cells
10
primary cell
Organ
40
connective tissue
32
pancreas
20
adipose tissue
19
liver
12
musculature of body
10
brain
epithelium
Project
113
AMP
Genome assembly (visualization)
60
hg19
48
GRCh38
Lab
113
AMP-T2D consortium
Audit category:
8
missing controlled_by
Audit category:
3
inconsistent control read length
2
inconsistent assembly
organ_slims!
epithelium
BIOSAMPLE
ASSAY
113 results
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ChIP-seq
tissue
subcutaneous abdominal adipose tissue
20
liver
19
islet of Langerhans
14
skeletal muscle tissue
12
brain
10
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in vitro differentiated cells
adipocyte
20
primary cell
skeletal muscle myoblast
6
pancreatic endocrine cell
4
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