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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
165
ChIP-seq
9
WGBS
2
ATAC-seq
2
DNase-seq
1
RRBS
Assay category
165
DNA binding
10
DNA methylation
4
DNA accessibility
Target of assay
102
histone modification
101
histone
59
broad histone mark
41
narrow histone mark
38
transcription factor
25
control
4
RNA binding protein
2
chromatin remodeller
Date released
458
February, 2021
315
November, 2017
194
May, 2020
179
August, 2017
63
December, 2017
54
November, 2018
40
August, 2021
40
May, 2022
28
July, 2019
23
October, 2018
19
June, 2019
14
February, 2023
11
October, 2019
6
November, 2020
5
December, 2019
5
January, 2019
5
March, 2020
3
February, 2020
2
April, 2018
2
July, 2018
2
May, 2021
1
August, 2018
1
December, 2018
1
January, 2018
1
May, 2023
1
November, 2019
1
October, 2017
Available data
100
fastq
97
bam
83
bigWig
64
bed narrowPeak
42
tagAlign
14
bed bed3+
9
bigBed narrowPeak
3
bed bedMethyl
3
bigBed bedMethyl
2
bed broadPeak
1
bigBed broadPeak
Organism
179
Homo sapiens
Biosample type
111
tissue
68
in vitro differentiated cells
Organ
188
pancreas
125
connective tissue
57
adipose tissue
54
liver
29
epithelium
26
musculature of body
Project
179
AMP
Genome assembly (visualization)
84
GRCh38
84
hg19
Lab
179
AMP-T2D consortium
Audit category:
17
missing controlled_by
Audit category:
7
inconsistent control read length
BIOSAMPLE
ASSAY
179 results
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Clear Filters
ChIP-seq
WGBS
ATAC-seq
DNase-seq
RRBS
tissue
liver
48
3
1
subcutaneous abdominal adipose tissue
36
3
white adipose tissue
12
adipose tissue
2
3
right lobe of liver
1
1
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in vitro differentiated cells
adipocyte
67
1
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