Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
126
ChIP-seq
5
ATAC-seq
4
DNase-seq
1
FAIRE-seq
Assay category
126
DNA binding
10
DNA accessibility
Target of assay
102
histone modification
101
histone
52
broad histone mark
48
narrow histone mark
24
transcription factor
7
RNA binding protein
3
chromatin remodeller
Date released
313
November, 2017
210
June, 2019
189
October, 2019
136
August, 2017
133
May, 2021
106
August, 2021
97
May, 2019
73
November, 2018
72
December, 2017
65
April, 2019
65
February, 2023
46
September, 2018
45
October, 2018
40
May, 2024
38
May, 2022
37
November, 2019
30
December, 2018
27
May, 2020
23
February, 2021
21
January, 2019
16
February, 2018
12
October, 2017
7
July, 2019
5
September, 2017
3
March, 2020
2
November, 2020
Available data
280
fastq
275
bam
266
bigWig
136
bed narrowPeak
89
tsv
78
tagAlign
36
bigBed narrowPeak
35
bed broadPeak
33
bed bed3+
15
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
Organism
136
Homo sapiens
Biosample type
60
tissue
43
in vitro differentiated cells
33
primary cell
Organ
46
connective tissue
43
pancreas
18
liver
17
epithelium
13
musculature of body
3
adipose tissue
Project
136
AMP
Genome assembly (visualization)
136
hg19
112
GRCh38
Lab
136
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
16
inconsistent control read length
2
inconsistent assembly
1
inconsistent control run_type
month_released!
January, 2018
BIOSAMPLE
ASSAY
136 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
FAIRE-seq
tissue
islet of Langerhans
18
1
1
liver
17
skeletal muscle tissue
13
pancreas
6
adipose tissue
1
+ See 3 more…
in vitro differentiated cells
adipocyte
42
1
primary cell
skeletal muscle myoblast
14
2
pancreatic alpha cell
7
1
pancreatic beta cell
7
1
pancreatic acinar cell
1
See all biosamples
Download