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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
89
total RNA-seq
87
ChIP-seq
3
ATAC-seq
1
DNase-seq
1
FAIRE-seq
Assay category
89
Transcription
87
DNA binding
5
DNA accessibility
Target of assay
60
histone
60
histone modification
32
narrow histone mark
28
broad histone mark
20
control
7
transcription factor
2
RNA binding protein
Date released
181
August, 2017
157
July, 2018
104
May, 2022
72
September, 2018
61
May, 2021
55
February, 2023
55
November, 2019
53
October, 2018
39
April, 2018
32
February, 2021
19
September, 2020
18
October, 2019
14
March, 2020
11
September, 2017
10
November, 2020
8
January, 2021
7
August, 2020
7
November, 2018
6
July, 2019
5
March, 2019
5
October, 2017
4
August, 2021
4
June, 2019
3
August, 2018
3
October, 2022
2
May, 2019
1
August, 2022
1
February, 2020
1
June, 2018
Available data
161
bam
161
fastq
153
bigWig
89
tsv
43
bed narrowPeak
19
bed bed3+
11
bigBed narrowPeak
9
tagAlign
6
bed broadPeak
Organism
181
Homo sapiens
Biosample type
140
tissue
41
primary cell
Organ
181
pancreas
125
connective tissue
57
adipose tissue
54
liver
29
epithelium
26
musculature of body
Project
181
AMP
Genome assembly (visualization)
153
hg19
146
GRCh38
Lab
181
AMP-T2D consortium
Audit category:
22
missing controlled_by
Audit category:
8
inconsistent control read length
BIOSAMPLE
ASSAY
181 results
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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
DNase-seq
FAIRE-seq
tissue
islet of Langerhans
89
42
1
1
pancreas
7
primary cell
pancreatic alpha cell
13
1
pancreatic beta cell
13
1
pancreatic endocrine cell
12
pancreatic acinar cell
1
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