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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
ChIP-seq
5
WGBS
2
DNase-seq
2
RRBS
Assay category
19
DNA binding
7
DNA methylation
2
DNA accessibility
Target of assay
96
histone
histone modification
60
broad histone mark
36
narrow histone mark
19
control
Date released
670
February, 2021
314
May, 2020
299
August, 2021
259
May, 2021
199
June, 2019
176
May, 2022
129
February, 2023
118
July, 2018
118
October, 2019
108
July, 2019
61
March, 2020
51
November, 2019
47
September, 2023
28
August, 2017
28
May, 2019
25
February, 2020
20
April, 2019
19
April, 2020
18
September, 2020
16
January, 2021
16
November, 2020
15
May, 2023
12
November, 2017
10
December, 2019
5
April, 2018
5
March, 2023
4
March, 2019
4
October, 2022
3
January, 2018
2
October, 2018
1
August, 2022
1
October, 2017
Available data
fastq
179
bam
149
bigWig
89
tsv
34
bed narrowPeak
21
bed bed3+
12
bigBed narrowPeak
11
tagAlign
6
bed bedMethyl
6
bigBed bedMethyl
4
bed broadPeak
4
bigBed broadPeak
Organism
28
Homo sapiens
Biosample type
25
tissue
2
in vitro differentiated cells
1
primary cell
Organ
10
connective tissue
8
adipose tissue
6
liver
6
pancreas
5
musculature of body
Project
28
AMP
Genome assembly (visualization)
1
hg19
Lab
28
AMP-T2D consortium
target.investigated_as!
histone modification
files.file_type!
fastq
BIOSAMPLE
ASSAY
28 results
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Clear Filters
ChIP-seq
WGBS
DNase-seq
RRBS
tissue
subcutaneous abdominal adipose tissue
5
3
islet of Langerhans
6
liver
3
2
skeletal muscle tissue
3
2
right lobe of liver
1
in vitro differentiated cells
adipocyte
2
primary cell
skeletal muscle myoblast
1
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