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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
201
ChIP-seq
Assay category
201
DNA binding
Target of assay
202
histone modification
201
histone
109
broad histone mark
91
narrow histone mark
50
control
47
transcription factor
8
RNA binding protein
3
chromatin remodeller
Date released
198
August, 2017
196
October, 2019
140
May, 2021
92
May, 2019
88
November, 2017
60
April, 2019
32
September, 2018
31
December, 2017
30
October, 2018
27
May, 2020
20
August, 2021
19
June, 2019
16
February, 2018
12
October, 2017
10
November, 2019
7
January, 2019
3
March, 2020
Available data
125
bigWig
110
bed narrowPeak
105
bam
102
fastq
74
tagAlign
37
bed broadPeak
30
bigBed narrowPeak
12
bed bed3+
11
bigBed broadPeak
Organism
195
Homo sapiens
Biosample type
125
tissue
38
primary cell
37
in vitro differentiated cells
1
cell line
Organ
69
connective tissue
69
pancreas
32
adipose tissue
32
liver
19
musculature of body
15
epithelium
Project
198
AMP
3
T1D
Genome assembly (visualization)
125
hg19
105
GRCh38
Lab
201
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
16
missing controlled_by
Audit category:
10
inconsistent control read length
3
inconsistent assembly
1
inconsistent control run_type
BIOSAMPLE
ASSAY
201 results
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Clear Filters
ChIP-seq
tissue
liver
32
subcutaneous abdominal adipose tissue
31
islet of Langerhans
30
skeletal muscle tissue
19
pancreas
12
+ See 1 more…
primary cell
pancreatic endocrine cell
12
skeletal muscle myoblast
12
pancreatic alpha cell
7
pancreatic beta cell
7
in vitro differentiated cells
adipocyte
37
cell line
EndoC_BH1
1
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