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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
87
ChIP-seq
Assay category
87
DNA binding
Target of assay
198
histone modification
197
histone
109
broad histone mark
87
narrow histone mark
50
control
47
transcription factor
8
RNA binding protein
3
chromatin remodeller
Date released
141
October, 2019
87
August, 2017
64
May, 2021
38
November, 2017
34
May, 2019
27
May, 2020
23
April, 2019
16
December, 2017
15
September, 2018
11
August, 2021
11
June, 2019
11
October, 2018
8
February, 2018
4
November, 2019
3
January, 2019
3
March, 2020
2
October, 2017
Available data
59
bigWig
51
bam
51
fastq
49
bed narrowPeak
29
tagAlign
15
bed broadPeak
11
bigBed narrowPeak
6
bed bed3+
5
bigBed broadPeak
Organism
85
Homo sapiens
Biosample type
50
tissue
21
primary cell
16
in vitro differentiated cells
Organ
34
pancreas
28
connective tissue
13
liver
12
adipose tissue
8
epithelium
7
musculature of body
Project
87
AMP
Genome assembly (visualization)
59
hg19
51
GRCh38
Lab
87
AMP-T2D consortium
Audit category:
11
missing controlled_by
Audit category:
7
inconsistent control read length
1
inconsistent assembly
inconsistent control run_type
audit.WARNING.category!
inconsistent control run_type
BIOSAMPLE
ASSAY
87 results
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Clear Filters
ChIP-seq
tissue
islet of Langerhans
14
liver
13
subcutaneous abdominal adipose tissue
11
skeletal muscle tissue
7
pancreas
4
+ See 1 more…
primary cell
pancreatic endocrine cell
8
skeletal muscle myoblast
5
pancreatic alpha cell
4
pancreatic beta cell
4
in vitro differentiated cells
adipocyte
16
See all biosamples
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