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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
24
ChIP-seq
15
total RNA-seq
1
pCHi-C
Assay category
24
DNA binding
15
Transcription
Target of assay
16
histone
16
histone modification
8
broad histone mark
8
control
8
narrow histone mark
Date released
132
May, 2021
68
August, 2017
43
December, 2017
42
August, 2021
39
February, 2018
26
February, 2021
16
February, 2023
8
March, 2020
8
October, 2019
5
November, 2019
4
January, 2018
2
December, 2019
1
August, 2018
Available data
40
fastq
39
bam
31
bigWig
16
bed narrowPeak
15
tsv
1
bedpe bed3+
Organism
40
Homo sapiens
Biosample type
40
in vitro differentiated cells
3
primary cell
Organ
13
embryo
1
adipose tissue
1
connective tissue
Project
40
AMP
Genome assembly (visualization)
31
GRCh38
31
hg19
Lab
40
AMP-T2D consortium
Audit category:
2
inconsistent control read length
BIOSAMPLE
ASSAY
40 results
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ChIP-seq
total RNA-seq
pCHi-C
in vitro differentiated cells
pancreatic endoderm
9
4
definitive endodermal cell
3
2
embryonic stem cell
3
2
endocrine cell
3
2
posterior foregut
3
2
primitive gut cell
3
2
islet precursor cell
1
white fat cell
1
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