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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
125
ChIP-seq
7
WGBS
6
RRBS
1
DNase-seq
1
pCHi-C
Assay category
125
DNA binding
13
DNA methylation
1
DNA accessibility
Target of assay
76
histone
76
histone modification
49
control
48
broad histone mark
28
narrow histone mark
Date released
186
February, 2023
180
May, 2022
164
August, 2021
150
February, 2021
139
August, 2017
107
October, 2019
96
May, 2021
80
May, 2020
72
November, 2017
56
September, 2020
47
September, 2023
30
November, 2019
29
October, 2018
23
July, 2019
23
May, 2019
22
December, 2017
19
April, 2020
16
January, 2021
15
April, 2019
15
May, 2023
14
March, 2020
11
November, 2020
9
October, 2017
8
February, 2018
8
June, 2019
8
November, 2018
6
September, 2017
5
December, 2018
5
March, 2019
5
March, 2023
4
January, 2019
4
July, 2018
4
October, 2022
1
August, 2018
1
August, 2022
1
December, 2019
1
September, 2018
Available data
291
fastq
285
bam
bigWig
142
bed narrowPeak
tsv
85
tagAlign
42
bigBed narrowPeak
41
bed broadPeak
33
bed bed3+
15
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
1
bedpe bed3+
Organism
139
Homo sapiens
Biosample type
106
tissue
21
in vitro differentiated cells
13
primary cell
Organ
61
connective tissue
41
adipose tissue
36
liver
29
pancreas
13
musculature of body
12
epithelium
Project
140
AMP
Genome assembly (visualization)
6
hg19
2
GRCh38
Lab
140
AMP-T2D consortium
files.file_type!
tsv
bigWig
BIOSAMPLE
ASSAY
140 results
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Clear Filters
ChIP-seq
WGBS
RRBS
DNase-seq
pCHi-C
tissue
subcutaneous abdominal adipose tissue
35
3
liver
31
3
1
islet of Langerhans
15
skeletal muscle tissue
9
4
adipose tissue
1
1
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in vitro differentiated cells
adipocyte
20
white fat cell
1
primary cell
pancreatic alpha cell
6
pancreatic beta cell
6
skeletal muscle myoblast
1
See all biosamples
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