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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
276
ChIP-seq
3
single cell RNA-seq
Assay category
276
DNA binding
3
Transcription
Target of assay
202
transcription factor
71
histone
71
histone modification
66
recombinant protein
45
broad histone mark
29
RNA binding protein
26
narrow histone mark
13
chromatin remodeller
2
other context
2
other post-translational modification
Date released
504
February, 2021
276
May, 2021
276
November, 2017
249
August, 2017
207
May, 2020
203
June, 2019
174
October, 2019
164
July, 2018
105
August, 2021
79
November, 2018
77
December, 2017
72
September, 2018
71
July, 2019
64
April, 2019
57
May, 2019
57
November, 2019
49
April, 2018
47
October, 2018
40
May, 2024
31
February, 2018
30
December, 2018
26
January, 2019
15
March, 2020
14
October, 2017
12
May, 2023
7
August, 2020
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
3
September, 2020
2
March, 2019
1
March, 2023
Available data
279
bam
278
bigWig
276
bed narrowPeak
276
bigBed narrowPeak
222
fastq
54
tagAlign
51
bed broadPeak
46
bigBed broadPeak
3
tsv
Organism
279
Homo sapiens
Biosample type
217
cell line
57
tissue
5
primary cell
Organ
217
liver
63
brain
7
epithelium
vasculature
3
pancreas
2
blood vessel
Project
279
AMP
Genome assembly (visualization)
279
GRCh38
278
hg19
Lab
279
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
17
inconsistent control read length
2
inconsistent control run_type
organ_slims!
vasculature
BIOSAMPLE
ASSAY
279 results
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Clear Filters
ChIP-seq
single cell RNA-seq
cell line
HepG2
217
tissue
layer of hippocampus
16
caudate nucleus
12
middle frontal area 46
11
substantia nigra
11
cingulate gyrus
6
+ See 1 more…
primary cell
astrocyte of the cerebellum
2
pancreatic alpha cell
2
pancreatic acinar cell
1
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