Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
340
ChIP-seq
3
single cell RNA-seq
1
pCHi-C
Assay category
340
DNA binding
3
Transcription
Target of assay
197
transcription factor
71
histone
71
histone modification
69
control
66
recombinant protein
42
broad histone mark
30
RNA binding protein
29
narrow histone mark
11
chromatin remodeller
1
other context
1
other post-translational modification
Date released
649
February, 2021
399
May, 2021
396
August, 2017
341
May, 2020
340
November, 2017
313
August, 2021
264
October, 2019
200
May, 2022
170
February, 2023
168
July, 2018
96
July, 2019
94
December, 2017
80
April, 2019
79
November, 2018
76
October, 2018
73
September, 2018
70
May, 2019
61
November, 2019
60
March, 2020
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
31
June, 2019
30
January, 2019
23
October, 2017
22
February, 2020
19
April, 2020
16
January, 2021
15
May, 2023
15
November, 2020
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
389
bam
331
bigWig
322
fastq
309
bed narrowPeak
308
bigBed narrowPeak
78
tagAlign
66
bed broadPeak
bigBed broadPeak
3
tar
3
tsv
1
bedpe bed3+
Organism
344
Homo sapiens
Biosample type
257
cell line
82
tissue
4
primary cell
1
in vitro differentiated cells
Organ
257
liver
85
brain
5
epithelium
3
pancreas
vasculature
1
adipose tissue
1
blood vessel
1
connective tissue
Project
344
AMP
Genome assembly (visualization)
233
GRCh38
218
hg19
Lab
344
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
8
inconsistent control read length
4
inconsistent control run_type
organ_slims!
vasculature
files.file_type!
bigBed broadPeak
BIOSAMPLE
ASSAY
344 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
single cell RNA-seq
pCHi-C
cell line
HepG2
257
tissue
layer of hippocampus
22
caudate nucleus
15
substantia nigra
15
cingulate gyrus
14
middle frontal area 46
14
+ See 1 more…
primary cell
pancreatic alpha cell
2
astrocyte of the cerebellum
1
pancreatic acinar cell
1
in vitro differentiated cells
white fat cell
1
See all biosamples
Download