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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
92
ChIP-seq
3
single cell RNA-seq
1
pCHi-C
Assay category
92
DNA binding
3
Transcription
Target of assay
69
control
15
histone
15
histone modification
10
narrow histone mark
8
transcription factor
5
broad histone mark
2
RNA binding protein
Date released
649
February, 2021
399
May, 2021
369
August, 2017
341
May, 2020
313
August, 2021
230
October, 2019
200
May, 2022
170
February, 2023
168
July, 2018
94
July, 2019
92
November, 2017
61
November, 2019
60
March, 2020
59
September, 2018
59
September, 2020
49
April, 2018
47
September, 2023
44
December, 2017
40
May, 2024
39
February, 2018
31
October, 2018
22
February, 2020
19
April, 2020
17
October, 2017
16
April, 2019
16
January, 2021
15
May, 2023
15
November, 2018
15
November, 2020
12
May, 2019
10
December, 2019
9
January, 2019
8
January, 2018
8
June, 2019
7
August, 2020
6
September, 2017
5
December, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
389
bam
331
bigWig
322
fastq
309
bed narrowPeak
bigBed narrowPeak
78
tagAlign
66
bed broadPeak
60
bigBed broadPeak
3
tar
3
tsv
1
bedpe bed3+
Organism
96
Homo sapiens
Biosample type
66
cell line
25
tissue
4
primary cell
1
in vitro differentiated cells
Organ
66
liver
28
brain
5
epithelium
3
pancreas
vasculature
1
adipose tissue
1
blood vessel
1
connective tissue
Project
96
AMP
Genome assembly (visualization)
24
hg19
3
GRCh38
Lab
96
AMP-T2D consortium
Audit category:
2
inconsistent control read length
organ_slims!
vasculature
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
96 results
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Clear Filters
ChIP-seq
single cell RNA-seq
pCHi-C
cell line
HepG2
66
tissue
cingulate gyrus
8
layer of hippocampus
6
substantia nigra
4
caudate nucleus
3
middle frontal area 46
3
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primary cell
pancreatic alpha cell
2
astrocyte of the cerebellum
1
pancreatic acinar cell
1
in vitro differentiated cells
white fat cell
1
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