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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
347
ChIP-seq
1
pCHi-C
Assay category
347
DNA binding
Target of assay
241
transcription factor
85
histone
85
histone modification
68
control
66
recombinant protein
broad histone mark
35
narrow histone mark
34
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
667
February, 2021
347
November, 2017
307
August, 2021
259
August, 2017
237
October, 2019
194
May, 2020
183
May, 2021
163
June, 2019
120
July, 2018
117
February, 2023
87
November, 2018
79
December, 2017
77
July, 2019
66
May, 2022
63
March, 2020
59
May, 2019
55
November, 2019
55
October, 2018
47
September, 2023
43
April, 2019
35
December, 2018
31
February, 2018
26
January, 2019
25
February, 2020
20
May, 2024
19
April, 2020
15
May, 2023
13
October, 2017
10
November, 2020
8
January, 2018
8
January, 2021
6
April, 2018
6
September, 2017
5
December, 2019
5
March, 2019
4
March, 2023
1
August, 2018
1
August, 2022
1
October, 2022
Available data
337
bam
308
fastq
280
bigWig
262
bed narrowPeak
261
bigBed narrowPeak
54
bed broadPeak
50
bigBed broadPeak
37
tagAlign
3
tar
1
bedpe bed3+
Organism
348
Homo sapiens
Biosample type
307
cell line
40
tissue
primary cell
1
in vitro differentiated cells
Organ
307
liver
40
brain
1
adipose tissue
1
connective tissue
Project
348
AMP
Genome assembly (visualization)
262
hg19
229
GRCh38
Lab
348
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
15
inconsistent control read length
4
inconsistent control run_type
target.investigated_as!
broad histone mark
biosample_type!
primary cell
BIOSAMPLE
ASSAY
348 results
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Clear Filters
ChIP-seq
pCHi-C
cell line
HepG2
307
tissue
layer of hippocampus
10
caudate nucleus
7
cingulate gyrus
7
middle frontal area 46
7
substantia nigra
7
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in vitro differentiated cells
white fat cell
1
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