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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
ATAC-seq
3
ChIP-seq
3
single cell RNA-seq
1
pCHi-C
Assay category
8
DNA accessibility
3
DNA binding
3
Transcription
Target of assay
12
histone
histone modification
10
broad histone mark
3
control
2
narrow histone mark
Date released
715
February, 2021
318
November, 2017
314
May, 2020
299
August, 2021
259
May, 2021
212
August, 2017
205
February, 2023
200
May, 2022
199
June, 2019
168
July, 2018
118
October, 2019
108
July, 2019
88
November, 2018
63
December, 2017
61
March, 2020
59
September, 2020
51
November, 2019
49
April, 2018
47
September, 2023
46
October, 2018
41
September, 2018
35
December, 2018
28
May, 2019
25
February, 2020
23
February, 2018
23
January, 2019
20
April, 2019
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
October, 2017
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
14
fastq
12
bam
11
bigWig
6
bed narrowPeak
3
tsv
2
tagAlign
1
bed broadPeak
1
bedpe bed3+
Organism
15
Homo sapiens
Biosample type
11
tissue
3
primary cell
1
in vitro differentiated cells
Organ
8
pancreas
4
brain
3
epithelium
2
adipose tissue
2
connective tissue
1
spleen
Project
15
AMP
Genome assembly (visualization)
11
GRCh38
10
hg19
Lab
14
AMP-T2D consortium
1
Stephen Parker, UMich
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
15 results
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Clear Filters
ATAC-seq
ChIP-seq
single cell RNA-seq
pCHi-C
tissue
body of pancreas
4
brain
3
cerebellum (Hemisphere)
1
islet of Langerhans
1
omental fat pad
1
+ See 1 more…
primary cell
pancreatic alpha cell
2
pancreatic acinar cell
1
in vitro differentiated cells
white fat cell
1
See all biosamples
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