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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
75
ChIP-seq
6
DNase-seq
4
total RNA-seq
2
ATAC-seq
1
FAIRE-seq
1
Hi-C
Assay category
75
DNA binding
9
DNA accessibility
4
Transcription
1
3D chromatin structure
Target of assay
57
histone
57
histone modification
39
broad histone mark
18
control
18
narrow histone mark
Date released
89
October, 2019
66
February, 2021
50
May, 2019
35
February, 2023
12
July, 2019
7
June, 2019
6
August, 2021
6
November, 2017
4
February, 2020
4
March, 2020
0
August, 2018
Available data
88
bam
67
bigWig
61
bed narrowPeak
59
bigBed narrowPeak
8
bed broadPeak
8
bigBed broadPeak
6
bed bed3+
4
tsv
1
hic
1
tar
Organism
89
Homo sapiens
Biosample type
68
tissue
21
primary cell
Organ
86
brain
69
limb
47
blood vessel
47
vasculature
42
nerve
38
epithelium
30
kidney
26
artery
21
eye
21
pancreas
21
vein
8
heart
7
liver
5
connective tissue
4
gonad
4
ovary
2
adipose tissue
2
pituitary gland
1
lymph node
1
skin of body
Project
89
AMP
Genome assembly (visualization)
68
hg19
64
GRCh38
Lab
89
AMP-T2D consortium
Audit category:
1
audit script error
BIOSAMPLE
ASSAY
89 results
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ChIP-seq
DNase-seq
total RNA-seq
ATAC-seq
FAIRE-seq
Hi-C
tissue
tibial nerve
35
2
4
1
tibial artery
23
2
1
primary cell
endothelial cell of umbilical vein
17
2
1
1
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