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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
60
ChIP-seq
15
total RNA-seq
9
ATAC-seq
Assay category
60
DNA binding
15
Transcription
9
DNA accessibility
Target of assay
39
transcription factor
19
histone
19
histone modification
11
narrow histone mark
8
broad histone mark
3
RNA binding protein
2
chromatin remodeller
Date released
551
February, 2021
334
November, 2017
303
May, 2021
272
August, 2017
260
May, 2020
210
June, 2019
207
October, 2019
164
July, 2018
97
May, 2019
85
July, 2019
80
November, 2018
72
December, 2017
72
September, 2018
65
April, 2019
49
April, 2018
47
August, 2021
47
October, 2018
40
May, 2024
31
February, 2018
31
November, 2019
30
December, 2018
26
January, 2019
20
March, 2020
20
May, 2022
14
October, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
November, 2020
5
September, 2017
3
August, 2018
3
February, 2023
3
June, 2018
3
September, 2020
Available data
136
bed narrowPeak
123
tsv
84
bigWig
83
bam
64
xls
57
txt
42
fastq
30
bigBed narrowPeak
24
tagAlign
5
bed bed3+
2
bedpe bed3+
2
hic
1
vcf
Organism
84
Homo sapiens
Biosample type
49
cell line
22
in vitro differentiated cells
10
primary cell
3
tissue
Organ
27
blood
27
bodily fluid
17
liver
10
epithelium
8
embryo
7
pancreas
3
spleen
2
connective tissue
Project
77
AMP
7
HPAP
Genome assembly (visualization)
76
hg19
68
GRCh38
Lab
61
AMP-T2D consortium
14
Bing Ren, UCSD
7
Klaus Kaestner, Upenn
2
Struan F.A. Grant, CHOP
Audit category:
1
inconsistent control
BIOSAMPLE
ASSAY
84 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
cell line
GM12878
27
HepG2
14
H1-hESC
8
in vitro differentiated cells
neural progenitor cell
13
7
adipocyte
1
osteoblast
1
primary cell
pancreatic alpha cell
5
hepatocyte
3
pancreatic beta cell
2
tissue
spleen
3
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