Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
42
total RNA-seq
18
ATAC-seq
2
snATAC-seq
1
CRISPR genome editing followed by sgRNA sequencing
Assay category
42
Transcription
20
DNA accessibility
Date released
188
August, 2017
157
July, 2018
104
May, 2022
72
September, 2018
61
May, 2021
56
February, 2023
55
November, 2019
53
October, 2018
39
April, 2018
32
February, 2021
19
September, 2020
18
October, 2019
14
March, 2020
11
September, 2017
10
November, 2020
8
January, 2021
7
August, 2020
7
November, 2018
6
July, 2019
5
March, 2019
5
October, 2017
4
August, 2021
4
June, 2019
3
August, 2018
3
October, 2022
2
May, 2019
1
August, 2022
1
February, 2020
1
June, 2018
0
January, 2019
Available data
44
fastq
7
bigWig
Organism
62
Homo sapiens
Biosample type
44
primary cell
18
tissue
1
cell line
Organ
63
pancreas
59
epithelium
36
heart
35
artery
35
blood vessel
35
vasculature
31
eye
18
blood
18
bodily fluid
14
connective tissue
8
bone element
8
skeleton
7
spleen
5
liver
1
adipose tissue
1
brain
Project
44
HPAP
18
T1D
1
AMP
Genome assembly (visualization)
7
GRCh38
Lab
44
Klaus Kaestner, Upenn
18
Kyle Gaulton, UCSD
1
AMP-T2D consortium
BIOSAMPLE
ASSAY
63 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ATAC-seq
snATAC-seq
CRISPR genome editing followed by sgRNA sequencing
primary cell
pancreatic alpha cell
27
5
pancreatic beta cell
10
2
tissue
islet of Langerhans
5
11
2
cell line
EndoC_BH1
1
Download