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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
ATAC-seq
2
total RNA-seq
1
ChIP-seq
1
Hi-C
Assay category
9
DNA accessibility
2
Transcription
1
3D chromatin structure
1
DNA binding
Target of assay
1
histone
1
histone modification
1
narrow histone mark
Date released
80
May, 2022
61
September, 2018
52
February, 2023
35
October, 2019
33
April, 2018
33
July, 2018
32
February, 2021
29
August, 2017
26
May, 2021
20
June, 2019
19
December, 2017
19
September, 2020
16
November, 2019
13
July, 2019
7
August, 2020
6
August, 2021
6
December, 2019
6
March, 2020
6
November, 2017
6
November, 2020
5
May, 2019
5
September, 2017
3
August, 2018
3
October, 2022
2
October, 2018
1
June, 2018
Available data
12
bigWig
7
fastq
3
bam
3
tsv
1
bed narrowPeak
1
bedpe bed3+
1
hic
Organism
13
Homo sapiens
Biosample type
8
primary cell
5
cell line
Organ
21
pancreas
13
epithelium
7
heart
5
musculature of body
4
blood vessel
4
vasculature
3
liver
2
brain
2
connective tissue
2
intestine
2
kidney
1
adipose tissue
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
small intestine
1
spleen
1
stomach
1
thymus
1
urinary bladder
1
vein
Project
7
HPAP
3
AMP
3
T1D
Genome assembly (visualization)
10
GRCh38
6
hg19
Lab
7
Klaus Kaestner, Upenn
6
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
BIOSAMPLE
ASSAY
13 results
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Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
Hi-C
primary cell
pancreatic alpha cell
5
pancreatic beta cell
2
endothelial cell of umbilical vein
1
cell line
EndoC_BH1
2
2
1
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