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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
146
single cell RNA-seq
90
total RNA-seq
Assay category
236
Transcription
85
DNA accessibility
43
DNA binding
3
3D chromatin structure
1
DNA sequencing
Date released
563
February, 2021
190
May, 2020
182
May, 2021
180
August, 2021
168
July, 2018
94
February, 2023
89
August, 2017
65
July, 2019
60
May, 2022
56
September, 2020
49
April, 2018
47
September, 2023
30
October, 2019
27
September, 2018
25
February, 2020
20
November, 2019
15
February, 2018
15
March, 2020
9
April, 2020
8
December, 2019
5
January, 2019
4
March, 2023
4
May, 2023
4
November, 2020
3
August, 2018
3
June, 2018
2
October, 2018
1
November, 2018
Available data
123
tsv
57
txt
38
fastq
19
zippedFastqFolder
15
bam
15
bigWig
Organism
236
Homo sapiens
Biosample type
156
tissue
56
primary cell
17
cell line
7
in vitro differentiated cells
Organ
92
heart
57
kidney
17
pancreas
16
epithelium
9
liver
8
embryo
6
blood vessel
6
vasculature
2
artery
Project
180
AMP
56
HPAP
Genome assembly (visualization)
15
GRCh38
15
hg19
Lab
113
AMP-T2D consortium
57
Katalin Susztak, Upenn
56
Klaus Kaestner, Upenn
10
Bing Ren, UCSD
BIOSAMPLE
ASSAY
236 results
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single cell RNA-seq
total RNA-seq
tissue
kidney
8
49
heart left ventricle
18
left cardiac atrium
18
right cardiac atrium
18
heart right ventricle
17
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primary cell
Langerhans cell
40
pancreatic alpha cell
15
pancreatic beta cell
1
cell line
HepG2
9
H1-hESC
8
in vitro differentiated cells
neural progenitor cell
7
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