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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
339
ChIP-seq
163
total RNA-seq
106
single cell RNA-seq
81
ATAC-seq
9
WGBS
6
RRBS
6
snATAC-seq
5
DNase-seq
5
STARR-seq
4
Capture-C
3
Hi-C
1
FAIRE-seq
1
RNA microarray
1
whole genome sequencing assay
Assay category
81
DNA accessibility
Date released
103
February, 2023
100
May, 2020
77
May, 2022
76
August, 2021
34
May, 2021
26
November, 2019
22
February, 2021
22
October, 2019
14
September, 2018
11
May, 2023
8
October, 2017
7
August, 2020
6
July, 2019
5
August, 2017
5
September, 2017
4
March, 2019
4
March, 2020
3
January, 2018
3
September, 2020
1
November, 2020
Available data
81
bed narrowPeak
64
xls
15
bam
7
bigWig
5
bigBed narrowPeak
5
fastq
Organism
81
Homo sapiens
Biosample type
66
tissue
12
in vitro differentiated cells
3
primary cell
Organ
64
kidney
3
connective tissue
3
epithelium
3
pancreas
1
adipose tissue
1
liver
Project
81
AMP
Genome assembly (visualization)
79
GRCh38
17
hg19
Lab
64
Katalin Susztak, Upenn
15
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
BIOSAMPLE
ASSAY
81 results
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ATAC-seq
tissue
kidney
64
right lobe of liver
1
subcutaneous adipose tissue
1
in vitro differentiated cells
neural progenitor cell
10
adipocyte
1
osteoblast
1
primary cell
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
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