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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
112
ChIP-seq
106
single cell RNA-seq
76
ATAC-seq
65
total RNA-seq
6
snATAC-seq
4
Capture-C
3
STARR-seq
2
Hi-C
1
RNA microarray
Assay category
112
DNA binding
Target of assay
87
histone
87
histone modification
49
broad histone mark
38
narrow histone mark
22
control
3
RNA binding protein
3
transcription factor
Date released
248
August, 2017
237
October, 2019
165
May, 2021
120
May, 2019
91
November, 2017
80
April, 2019
74
October, 2018
40
May, 2024
34
December, 2018
32
September, 2018
31
December, 2017
31
June, 2019
25
January, 2019
24
February, 2018
21
August, 2021
21
November, 2018
15
October, 2017
13
November, 2019
8
February, 2021
6
September, 2017
3
March, 2020
Available data
98
bam
86
tagAlign
79
bigWig
77
bed narrowPeak
63
bigBed narrowPeak
12
bed broadPeak
9
fastq
6
bigBed broadPeak
Organism
112
Homo sapiens
Biosample type
82
tissue
21
in vitro differentiated cells
9
primary cell
Organ
liver
91
brain
10
epithelium
6
vasculature
3
blood vessel
Project
112
AMP
Genome assembly (visualization)
76
GRCh38
27
hg19
Lab
112
AMP-T2D consortium
organ_slims!
liver
BIOSAMPLE
ASSAY
112 results
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Clear Filters
ChIP-seq
tissue
layer of hippocampus
22
caudate nucleus
15
substantia nigra
15
cingulate gyrus
14
middle frontal area 46
14
+ See 1 more…
in vitro differentiated cells
neural progenitor cell
21
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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