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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
106
single cell RNA-seq
76
ATAC-seq
74
total RNA-seq
43
ChIP-seq
6
snATAC-seq
5
STARR-seq
4
Capture-C
3
Hi-C
1
RNA microarray
1
whole genome sequencing assay
Assay category
74
Transcription
Date released
545
February, 2021
190
May, 2020
182
May, 2021
120
July, 2018
93
February, 2023
89
August, 2017
78
August, 2021
44
July, 2019
30
October, 2019
26
May, 2022
26
September, 2018
25
February, 2020
20
November, 2019
16
September, 2020
15
February, 2018
15
March, 2020
6
April, 2018
5
December, 2019
5
January, 2019
4
November, 2020
2
October, 2018
1
May, 2023
Available data
49
txt
25
tsv
15
bam
15
bigWig
2
bed bed3+
Organism
78
Homo sapiens
Biosample type
50
tissue
19
cell line
9
in vitro differentiated cells
Organ
49
kidney
9
liver
8
embryo
3
pancreas
2
connective tissue
2
epithelium
Project
78
AMP
Genome assembly (visualization)
17
hg19
15
GRCh38
Lab
49
Katalin Susztak, Upenn
17
AMP-T2D consortium
10
Bing Ren, UCSD
2
Struan F.A. Grant, CHOP
Audit category:
2
inconsistent ontology term
BIOSAMPLE
ASSAY
78 results
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Clear Filters
total RNA-seq
Capture-C
tissue
kidney
49
islet of Langerhans
1
cell line
HepG2
9
H1-hESC
8
EndoC_BH1
2
in vitro differentiated cells
neural progenitor cell
7
adipocyte
1
osteoblast
1
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