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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
75
ATAC-seq
49
total RNA-seq
11
single cell RNA-seq
6
snATAC-seq
2
STARR-seq
1
Hi-C
Assay category
81
DNA accessibility
60
Transcription
1
3D chromatin structure
Date released
130
August, 2021
77
June, 2019
47
September, 2023
23
April, 2019
17
October, 2019
14
May, 2023
10
July, 2019
8
February, 2021
3
December, 2019
2
May, 2019
Available data
64
bed narrowPeak
64
xls
57
txt
1
hic
Organism
144
Homo sapiens
Biosample type
142
tissue
2
cell line
Organ
144
kidney
92
heart
35
liver
8
embryo
6
blood vessel
6
connective tissue
6
vasculature
4
epithelium
2
adipose tissue
2
artery
2
pancreas
Project
144
AMP
Genome assembly (visualization)
75
GRCh38
1
hg19
Lab
142
Katalin Susztak, Upenn
2
Bing Ren, UCSD
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
144 results
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ATAC-seq
total RNA-seq
single cell RNA-seq
snATAC-seq
STARR-seq
Hi-C
tissue
kidney
75
49
11
6
1
cell line
HEK293T
2
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