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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
ChIP-seq
15
total RNA-seq
12
ATAC-seq
2
Capture-C
1
Hi-C
Assay category
29
DNA binding
15
Transcription
12
DNA accessibility
1
3D chromatin structure
Target of assay
18
histone
18
histone modification
11
narrow histone mark
11
transcription factor
7
broad histone mark
1
RNA binding protein
Date released
278
May, 2021
275
November, 2017
122
February, 2021
96
August, 2017
90
May, 2020
72
September, 2018
59
August, 2021
54
November, 2018
54
October, 2019
48
July, 2018
43
April, 2018
41
December, 2017
40
June, 2019
31
February, 2018
31
July, 2019
27
December, 2018
20
January, 2019
19
November, 2019
14
March, 2020
12
February, 2023
6
November, 2020
5
December, 2019
5
September, 2017
4
May, 2019
3
August, 2018
3
June, 2018
3
October, 2022
2
October, 2018
1
January, 2018
Available data
46
bigWig
41
bed narrowPeak
40
bam
15
tagAlign
15
tsv
5
bed bed3+
1
bedpe bed3+
1
hic
Organism
59
Homo sapiens
Biosample type
33
in vitro differentiated cells
23
cell line
3
primary cell
tissue
Organ
18
liver
8
embryo
4
connective tissue
3
epithelium
Project
59
AMP
Genome assembly (visualization)
59
hg19
41
GRCh38
Lab
40
AMP-T2D consortium
15
Bing Ren, UCSD
4
Struan F.A. Grant, CHOP
biosample_type!
tissue
BIOSAMPLE
ASSAY
59 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
Capture-C
Hi-C
in vitro differentiated cells
neural progenitor cell
12
7
10
adipocyte
1
1
osteoblast
1
1
cell line
HepG2
14
1
H1-hESC
8
primary cell
hepatocyte
3
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