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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
106
single cell RNA-seq
64
ATAC-seq
50
total RNA-seq
snATAC-seq
2
Hi-C
1
RNA microarray
Assay category
156
Transcription
64
DNA accessibility
2
3D chromatin structure
Date released
545
February, 2021
284
August, 2017
242
October, 2019
223
August, 2021
193
May, 2020
163
June, 2019
120
July, 2018
115
May, 2019
93
February, 2023
82
November, 2017
80
April, 2019
77
July, 2019
74
October, 2018
65
May, 2022
48
December, 2017
47
September, 2023
40
March, 2020
40
May, 2021
40
November, 2019
26
November, 2018
25
February, 2020
23
October, 2017
15
May, 2023
9
April, 2020
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
Available data
99
tsv
64
bed narrowPeak
64
xls
57
txt
1
bedpe bed3+
1
hic
Organism
222
Homo sapiens
Biosample type
223
tissue
44
cell line
42
in vitro differentiated cells
4
primary cell
Organ
122
kidney
92
heart
6
blood vessel
6
vasculature
2
artery
2
pancreas
1
adipose tissue
1
connective tissue
Project
223
AMP
Genome assembly (visualization)
64
GRCh38
1
hg19
Lab
122
Katalin Susztak, Upenn
99
AMP-T2D consortium
2
Bing Ren, UCSD
assay_title!
snATAC-seq
BIOSAMPLE
ASSAY
223 results
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single cell RNA-seq
ATAC-seq
total RNA-seq
Hi-C
RNA microarray
tissue
kidney
8
64
49
1
heart left ventricle
18
left cardiac atrium
18
right cardiac atrium
18
heart right ventricle
17
aorta
4
aortic valve
4
pulmonary valve
4
tricuspid valve
4
mitral valve
3
cardiac atrium
2
cardiac ventricle
2
interventricular septum
2
islet of Langerhans
1
1
pulmonary artery
2
subcutaneous adipose tissue
1
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