Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
143
ATAC-seq
107
single cell RNA-seq
63
total RNA-seq
8
snATAC-seq
2
Hi-C
1
RNA microarray
Assay category
170
Transcription
151
DNA accessibility
2
3D chromatin structure
Date released
545
February, 2021
284
August, 2017
242
October, 2019
229
August, 2021
193
May, 2020
163
June, 2019
120
July, 2018
115
May, 2019
95
February, 2023
82
November, 2017
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
48
December, 2017
47
September, 2023
40
March, 2020
40
May, 2021
40
May, 2024
40
November, 2019
26
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
127
bed narrowPeak
103
tsv
64
xls
61
txt
5
bed bed3
1
bedpe bed3+
1
hic
Organism
323
Homo sapiens
Biosample type
324
tissue
92
primary cell
58
in vitro differentiated cells
50
cell line
Organ
128
heart
128
kidney
41
blood vessel
41
vasculature
37
artery
31
eye
20
pancreas
14
epithelium
8
bone element
8
skeleton
2
adipose tissue
2
connective tissue
1
brain
Project
306
AMP
18
T1D
Genome assembly (visualization)
99
GRCh38
34
hg19
Lab
176
AMP-T2D consortium
128
Katalin Susztak, Upenn
18
Kyle Gaulton, UCSD
2
Bing Ren, UCSD
BIOSAMPLE
ASSAY
324 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
single cell RNA-seq
total RNA-seq
snATAC-seq
Hi-C
RNA microarray
tissue
kidney
64
8
49
6
1
coronary artery
35
islet of Langerhans
11
6
2
1
heart left ventricle
18
left cardiac atrium
18
right cardiac atrium
18
heart right ventricle
17
retina
15
2
pigmented layer of retina
12
2
aorta
4
aortic valve
4
pulmonary valve
4
tricuspid valve
4
mitral valve
3
acetabular part of hip bone
1
1
cardiac atrium
2
cardiac ventricle
2
ilium
1
1
interventricular septum
2
ischium
1
1
pubis
1
1
pulmonary artery
2
adipose tissue
1
brain
1
heart
1
subcutaneous adipose tissue
1
See all biosamples
Download