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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
170
total RNA-seq
106
single cell RNA-seq
64
ATAC-seq
6
snATAC-seq
2
Hi-C
1
RNA microarray
Assay category
276
Transcription
70
DNA accessibility
2
3D chromatin structure
Date released
545
February, 2021
284
August, 2017
242
October, 2019
229
August, 2021
193
May, 2020
163
June, 2019
120
July, 2018
115
May, 2019
95
February, 2023
82
November, 2017
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
48
December, 2017
47
September, 2023
40
March, 2020
40
May, 2021
40
May, 2024
40
November, 2019
26
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
215
tsv
116
bam
116
bigWig
64
bed narrowPeak
64
xls
57
txt
2
fastq
1
bedpe bed3+
1
hic
Organism
348
Homo sapiens
Biosample type
349
tissue
52
primary cell
44
cell line
42
in vitro differentiated cells
Organ
128
kidney
122
pancreas
92
heart
6
blood vessel
6
vasculature
2
artery
1
adipose tissue
1
connective tissue
Project
349
AMP
Genome assembly (visualization)
180
GRCh38
117
hg19
Lab
219
AMP-T2D consortium
128
Katalin Susztak, Upenn
2
Bing Ren, UCSD
BIOSAMPLE
ASSAY
349 results
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Clear Filters
total RNA-seq
single cell RNA-seq
ATAC-seq
snATAC-seq
Hi-C
RNA microarray
tissue
kidney
49
8
64
6
1
islet of Langerhans
121
1
heart left ventricle
18
left cardiac atrium
18
right cardiac atrium
18
heart right ventricle
17
aorta
4
aortic valve
4
pulmonary valve
4
tricuspid valve
4
mitral valve
3
cardiac atrium
2
cardiac ventricle
2
interventricular septum
2
pulmonary artery
2
subcutaneous adipose tissue
1
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