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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
98
single cell RNA-seq
16
ChIP-seq
15
total RNA-seq
10
ATAC-seq
2
Capture-C
1
RNA microarray
Assay category
113
Transcription
16
DNA binding
10
DNA accessibility
Target of assay
17
histone
17
histone modification
narrow histone mark
8
broad histone mark
8
control
Date released
670
February, 2021
368
November, 2017
323
August, 2017
269
May, 2020
207
June, 2019
173
October, 2019
168
July, 2018
160
May, 2021
142
August, 2021
108
July, 2019
103
February, 2023
88
November, 2018
86
May, 2019
78
December, 2017
65
October, 2018
61
March, 2020
58
September, 2018
57
April, 2019
57
November, 2019
49
April, 2018
35
December, 2018
31
February, 2018
27
January, 2019
25
February, 2020
20
October, 2017
11
September, 2017
10
December, 2019
8
January, 2018
6
November, 2020
4
August, 2018
3
June, 2018
2
May, 2022
1
August, 2022
1
May, 2023
1
October, 2022
Available data
113
tsv
40
bam
22
bigWig
17
bed narrowPeak
15
tagAlign
1
bed bed3+
Organism
141
Homo sapiens
Biosample type
99
tissue
31
in vitro differentiated cells
10
cell line
2
primary cell
Organ
92
heart
8
embryo
6
blood vessel
6
vasculature
4
epithelium
2
artery
2
liver
2
pancreas
1
adipose tissue
1
connective tissue
Project
142
AMP
Genome assembly (visualization)
32
GRCh38
31
hg19
Lab
142
AMP-T2D consortium
128
Katalin Susztak, Upenn
34
Bing Ren, UCSD
4
Struan F.A. Grant, CHOP
Audit category:
2
inconsistent ontology term
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
142 results
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Clear Filters
single cell RNA-seq
ChIP-seq
total RNA-seq
ATAC-seq
Capture-C
RNA microarray
tissue
heart left ventricle
18
left cardiac atrium
18
right cardiac atrium
18
heart right ventricle
17
aorta
4
+ See 9 more…
in vitro differentiated cells
neural progenitor cell
14
7
10
cell line
H1-hESC
8
EndoC_BH1
2
primary cell
hepatocyte
2
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