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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
ChIP-seq
2
Capture-C
1
ATAC-seq
1
Hi-C
1
total RNA-seq
Assay category
17
DNA binding
1
3D chromatin structure
1
DNA accessibility
1
Transcription
Target of assay
13
histone
13
histone modification
7
broad histone mark
6
narrow histone mark
3
control
1
RNA binding protein
1
transcription factor
Date released
80
May, 2022
61
September, 2018
52
February, 2023
35
October, 2019
33
April, 2018
33
July, 2018
32
February, 2021
29
August, 2017
26
May, 2021
20
June, 2019
19
December, 2017
19
September, 2020
16
November, 2019
13
July, 2019
7
August, 2020
6
August, 2021
6
December, 2019
6
March, 2020
6
November, 2017
6
November, 2020
5
May, 2019
5
September, 2017
3
August, 2018
3
October, 2022
2
October, 2018
1
June, 2018
0
January, 2019
Available data
19
bam
15
bed narrowPeak
15
bigWig
4
tagAlign
3
bed bed3+
1
bedpe bed3+
1
hic
1
tsv
Organism
22
Homo sapiens
Biosample type
18
cell line
4
primary cell
Organ
130
kidney
92
heart
59
pancreas
40
liver
22
epithelium
18
blood
18
bodily fluid
8
embryo
7
spleen
6
blood vessel
6
connective tissue
6
vasculature
2
adipose tissue
2
artery
Project
22
AMP
Genome assembly (visualization)
17
hg19
16
GRCh38
Lab
22
AMP-T2D consortium
Audit category:
18
inconsistent ontology term
BIOSAMPLE
ASSAY
22 results
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Clear Filters
ChIP-seq
Capture-C
ATAC-seq
Hi-C
total RNA-seq
cell line
EndoC_BH1
13
2
1
1
1
primary cell
hepatocyte
4
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