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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
ChIP-seq
Assay category
21
DNA binding
Target of assay
43
histone
43
histone modification
25
transcription factor
24
control
22
narrow histone mark
21
broad histone mark
7
RNA binding protein
6
chromatin remodeller
Date released
109
August, 2017
76
May, 2021
58
May, 2019
55
October, 2019
50
November, 2017
37
April, 2019
20
May, 2024
19
October, 2018
17
September, 2018
15
December, 2017
10
October, 2017
9
August, 2021
8
February, 2018
8
June, 2019
6
November, 2019
4
January, 2019
Available data
20
bed narrowPeak
20
bigWig
19
bam
12
fastq
7
tagAlign
4
bigBed narrowPeak
1
bed bed3+
Organism
21
Homo sapiens
Biosample type
15
in vitro differentiated cells
4
tissue
1
cell line
1
primary cell
Organ
4
spleen
3
embryo
2
liver
1
epithelium
Project
21
AMP
Genome assembly (visualization)
19
GRCh38
19
hg19
Lab
20
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
1
inconsistent control read length
BIOSAMPLE
ASSAY
21 results
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ChIP-seq
in vitro differentiated cells
neural progenitor cell
7
pancreatic endoderm
3
definitive endodermal cell
1
embryonic stem cell
1
endocrine cell
1
+ See 2 more…
tissue
spleen
4
cell line
HepG2
1
primary cell
hepatocyte
1
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