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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
74
ChIP-seq
Assay category
251
DNA accessibility
180
Transcription
74
DNA binding
3
3D chromatin structure
1
DNA sequencing
Target of assay
39
histone
39
histone modification
22
narrow histone mark
20
control
17
broad histone mark
15
transcription factor
5
RNA binding protein
Date released
406
November, 2017
296
August, 2017
242
October, 2019
165
May, 2021
120
May, 2019
94
December, 2017
80
April, 2019
74
October, 2018
70
November, 2018
50
May, 2020
43
August, 2021
40
May, 2024
34
December, 2018
32
September, 2018
31
June, 2019
25
January, 2019
24
February, 2018
15
October, 2017
13
November, 2019
8
February, 2021
6
September, 2017
3
March, 2020
Available data
55
bam
53
bed narrowPeak
53
bigWig
24
tagAlign
23
bigBed narrowPeak
3
bed bed3+
Organism
74
Homo sapiens
Biosample type
35
primary cell
21
in vitro differentiated cells
18
cell line
Organ
22
liver
12
connective tissue
10
epithelium
10
musculature of body
5
heart
3
eye
3
kidney
Project
74
AMP
Genome assembly (visualization)
52
hg19
39
GRCh38
Lab
56
AMP-T2D consortium
18
Bing Ren, UCSD
Audit category:
22
inconsistent ontology term
organ_slims!
ureter
BIOSAMPLE
ASSAY
74 results
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ChIP-seq
primary cell
skeletal muscle satellite cell
8
mesenchymal stem cell
7
cardiac fibroblast
5
hepatocyte
4
cardiac muscle cell
3
+ See 3 more…
in vitro differentiated cells
neural progenitor cell
21
cell line
HepG2
18
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