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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
ChIP-seq
15
total RNA-seq
12
ATAC-seq
4
Capture-C
3
STARR-seq
Assay category
21
DNA binding
15
Transcription
12
DNA accessibility
Target of assay
14
histone
14
histone modification
7
broad histone mark
7
control
7
narrow histone mark
Date released
359
May, 2021
168
February, 2021
147
May, 2020
134
May, 2022
127
August, 2017
110
February, 2023
73
September, 2018
71
October, 2019
59
September, 2020
55
August, 2021
53
June, 2019
48
July, 2018
43
April, 2018
39
February, 2018
31
December, 2017
29
July, 2019
27
December, 2018
24
March, 2020
21
November, 2019
18
January, 2019
16
November, 2018
12
November, 2020
9
November, 2017
8
January, 2021
7
August, 2020
6
January, 2018
5
March, 2023
5
May, 2019
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
2
December, 2019
2
October, 2018
Available data
45
bam
30
bigWig
25
bed narrowPeak
20
tagAlign
15
tsv
2
bed bed3+
Organism
55
Homo sapiens
Biosample type
tissue
42
in vitro differentiated cells
13
cell line
Organ
liver
8
embryo
6
epithelium
4
connective tissue
2
kidney
2
pancreas
Project
55
AMP
Genome assembly (visualization)
41
hg19
38
GRCh38
Lab
48
AMP-T2D consortium
4
Struan F.A. Grant, CHOP
3
Bing Ren, UCSD
Audit category:
3
inconsistent ontology term
organ_slims!
liver
biosample_type!
tissue
BIOSAMPLE
ASSAY
55 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
Capture-C
STARR-seq
in vitro differentiated cells
neural progenitor cell
21
7
10
adipocyte
1
1
osteoblast
1
1
cell line
H1-hESC
8
EndoC_BH1
2
HEK293T
2
Synthesized DNA
1
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