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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
111
ChIP-seq
3
WGBS
1
ATAC-seq
1
DNase-seq
1
RRBS
Assay category
111
DNA binding
4
DNA methylation
2
DNA accessibility
Target of assay
50
histone modification
49
histone
37
transcription factor
29
broad histone mark
24
control
20
narrow histone mark
4
RNA binding protein
3
chromatin remodeller
Date released
315
November, 2017
194
May, 2020
63
December, 2017
54
August, 2017
53
November, 2018
40
May, 2022
35
August, 2021
10
July, 2019
7
October, 2019
5
December, 2019
5
January, 2019
3
February, 2021
3
March, 2020
2
June, 2019
1
December, 2018
1
February, 2020
Available data
91
fastq
89
bam
68
bed narrowPeak
68
bigWig
56
bigBed narrowPeak
20
tagAlign
3
bed bed3+
1
bed bedMethyl
1
bigBed bedMethyl
Organism
117
Homo sapiens
Biosample type
102
tissue
15
in vitro differentiated cells
Organ
188
pancreas
125
connective tissue
117
liver
57
adipose tissue
48
epithelium
26
musculature of body
13
embryo
Project
117
AMP
Genome assembly (visualization)
70
hg19
69
GRCh38
Lab
117
AMP-T2D consortium
Audit category:
27
inconsistent control
Audit category:
1
inconsistent control read length
BIOSAMPLE
ASSAY
117 results
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Clear Filters
ChIP-seq
WGBS
ATAC-seq
DNase-seq
RRBS
tissue
liver
86
3
1
right lobe of liver
10
1
1
in vitro differentiated cells
hepatocyte
15
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