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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
66
ChIP-seq
25
total RNA-seq
Assay category
66
DNA binding
25
Transcription
Target of assay
40
transcription factor
18
control
17
histone
17
histone modification
narrow histone mark
8
broad histone mark
2
RNA binding protein
2
chromatin remodeller
Date released
683
February, 2021
364
November, 2017
314
May, 2020
311
May, 2021
304
August, 2021
302
August, 2017
189
June, 2019
153
February, 2023
147
October, 2019
135
July, 2018
120
May, 2022
95
July, 2019
88
November, 2018
82
May, 2019
66
December, 2017
63
October, 2018
57
April, 2019
56
March, 2020
47
September, 2023
45
November, 2019
40
September, 2020
35
December, 2018
31
February, 2018
27
January, 2019
25
February, 2020
25
May, 2024
21
October, 2017
19
April, 2020
16
April, 2018
16
January, 2021
15
May, 2023
10
November, 2020
8
January, 2018
8
September, 2018
6
September, 2017
5
March, 2019
5
March, 2023
4
December, 2019
2
June, 2018
1
August, 2018
1
August, 2022
1
October, 2022
Available data
66
bam
66
fastq
48
bed narrowPeak
48
bigWig
34
bigBed narrowPeak
25
tsv
10
bed bed3+
Organism
91
Homo sapiens
Biosample type
71
tissue
18
in vitro differentiated cells
2
stem cell
Organ
57
liver
12
brain
epithelium
8
embryo
3
blood vessel
3
heart
3
limb
3
vasculature
2
adipose tissue
2
artery
2
connective tissue
2
musculature of body
1
eye
1
nerve
1
pancreas
1
spinal cord
Project
91
AMP
Genome assembly (visualization)
53
GRCh38
53
hg19
Lab
91
AMP-T2D consortium
Audit category:
27
inconsistent control
1
inconsistent ontology term
Audit category:
9
inconsistent control read length
target.investigated_as!
narrow histone mark
organ_slims!
epithelium
BIOSAMPLE
ASSAY
91 results
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Clear Filters
ChIP-seq
total RNA-seq
tissue
liver
38
right lobe of liver
8
1
Ammon's horn
1
C1 segment of cervical spinal cord
1
amygdala
1
+ See 21 more…
in vitro differentiated cells
pancreatic endoderm
6
Posterior foregut
4
definitive endodermal cell
4
primitive gut cell
4
stem cell
hESC
2
See all biosamples
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