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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
44
ChIP-seq
5
GRO-seq
3
ATAC-seq
Assay category
44
DNA binding
3
DNA accessibility
Target of assay
21
control
14
histone
14
histone modification
9
narrow histone mark
9
transcription factor
5
broad histone mark
Date released
715
February, 2021
399
May, 2021
369
August, 2017
341
May, 2020
319
August, 2021
244
October, 2019
205
February, 2023
200
May, 2022
168
July, 2018
106
July, 2019
94
November, 2017
64
March, 2020
61
November, 2019
59
September, 2018
59
September, 2020
49
April, 2018
47
September, 2023
44
December, 2017
39
February, 2018
31
October, 2018
25
February, 2020
23
May, 2019
19
April, 2020
17
October, 2017
16
April, 2019
16
January, 2021
15
May, 2023
15
November, 2018
15
November, 2020
10
December, 2019
9
January, 2019
8
January, 2018
8
June, 2019
7
August, 2020
6
September, 2017
5
December, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
99
fastq
94
bam
80
bigWig
72
bed narrowPeak
bigBed narrowPeak
15
bed bed3+
Organism
52
Homo sapiens
Biosample type
33
in vitro differentiated cells
14
tissue
4
stem cell
1
cell line
Organ
14
embryo
13
liver
5
epithelium
1
adipose tissue
1
blood
1
bodily fluid
1
connective tissue
1
musculature of body
Project
52
AMP
Genome assembly (visualization)
30
hg19
27
GRCh38
5
hg18
Lab
52
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
11
inconsistent control read length
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
52 results
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Clear Filters
ChIP-seq
GRO-seq
ATAC-seq
in vitro differentiated cells
pancreatic endoderm
9
1
Posterior foregut
5
1
definitive endodermal cell
5
1
primitive gut cell
5
1
Hepatic endoderm
4
+ See 1 more…
tissue
liver
9
right lobe of liver
3
adipose tissue
1
skeletal muscle tissue
1
stem cell
hESC
3
1
cell line
GM12878
1
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