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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
92
ChIP-seq
5
total RNA-seq
Assay category
92
DNA binding
5
Transcription
Target of assay
38
histone
38
histone modification
29
transcription factor
25
control
19
broad histone mark
19
narrow histone mark
10
RNA binding protein
7
chromatin remodeller
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
67
December, 2017
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
34
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
97
bam
97
fastq
71
bigWig
66
bed narrowPeak
44
bigBed narrowPeak
15
bed bed3+
5
tsv
Organism
97
Homo sapiens
Biosample type
43
in vitro differentiated cells
28
tissue
23
cell line
3
stem cell
Organ
41
liver
19
epithelium
18
blood
18
bodily fluid
13
embryo
7
spleen
Project
97
AMP
Genome assembly (visualization)
76
GRCh38
76
hg19
Lab
97
AMP-T2D consortium
Audit category:
inconsistent control
4
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
11
inconsistent control read length
audit.ERROR.category!
inconsistent control
BIOSAMPLE
ASSAY
97 results
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Clear Filters
ChIP-seq
total RNA-seq
in vitro differentiated cells
hepatocyte
15
pancreatic endoderm
9
Posterior foregut
5
definitive endodermal cell
5
primitive gut cell
5
+ See 1 more…
tissue
liver
11
right lobe of liver
10
spleen
7
cell line
GM12878
18
HepG2
5
stem cell
hESC
3
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