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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
75
ChIP-seq
13
total RNA-seq
4
ATAC-seq
Assay category
75
DNA binding
13
Transcription
4
DNA accessibility
Target of assay
42
transcription factor
33
histone
33
histone modification
18
narrow histone mark
15
broad histone mark
4
RNA binding protein
3
chromatin remodeller
Date released
551
February, 2021
334
November, 2017
303
May, 2021
272
August, 2017
260
May, 2020
210
June, 2019
207
October, 2019
164
July, 2018
97
May, 2019
85
July, 2019
80
November, 2018
72
December, 2017
72
September, 2018
April, 2019
49
April, 2018
47
August, 2021
47
October, 2018
40
May, 2024
31
February, 2018
31
November, 2019
30
December, 2018
26
January, 2019
20
March, 2020
20
May, 2022
14
October, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
November, 2020
5
September, 2017
3
August, 2018
3
February, 2023
3
June, 2018
3
September, 2020
Available data
110
bam
94
fastq
92
bigWig
75
bed narrowPeak
50
bigBed narrowPeak
45
tsv
15
bed bed3+
12
bedpe bed3+
10
hic
2
ibed
Organism
92
Homo sapiens
Biosample type
47
tissue
36
in vitro differentiated cells
7
cell line
2
stem cell
Organ
51
liver
21
epithelium
10
pancreas
8
embryo
2
heart
2
musculature of body
1
blood vessel
1
vasculature
Project
87
AMP
5
T1D
Genome assembly (visualization)
92
hg19
88
GRCh38
Lab
92
AMP-T2D consortium
Audit category:
27
inconsistent control
9
inconsistent ontology term
Audit category:
11
inconsistent control read length
month_released!
April, 2019
BIOSAMPLE
ASSAY
92 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
tissue
liver
29
1
right lobe of liver
7
islet of Langerhans
2
2
psoas muscle
2
aorta
1
+ See 3 more…
in vitro differentiated cells
hepatocyte
14
pancreatic endoderm
6
Posterior foregut
4
definitive endodermal cell
4
primitive gut cell
4
+ See 3 more…
cell line
EndoC_BH1
1
2
2
early embryonic cell
2
stem cell
hESC
2
See all biosamples
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