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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
22
ChIP-seq
6
total RNA-seq
Assay category
22
DNA binding
6
Transcription
Target of assay
21
control
1
histone
1
histone modification
1
narrow histone mark
Date released
549
February, 2021
256
May, 2020
174
May, 2021
164
July, 2018
160
August, 2017
80
November, 2017
75
July, 2019
61
October, 2019
49
April, 2018
31
October, 2018
26
September, 2018
23
August, 2021
23
February, 2018
23
May, 2019
22
December, 2017
22
November, 2019
15
April, 2019
14
November, 2018
13
March, 2020
9
January, 2019
8
June, 2019
6
May, 2022
6
September, 2017
5
December, 2019
4
December, 2018
4
November, 2020
3
August, 2018
3
June, 2018
3
October, 2017
1
March, 2019
Available data
134
zippedFastqFolder
118
bam
118
fastq
bed narrowPeak
92
bigWig
50
bigBed narrowPeak
16
bed bed3+
7
txt
Organism
28
Homo sapiens
Biosample type
18
tissue
9
in vitro differentiated cells
1
stem cell
Organ
13
liver
6
pancreas
5
embryo
3
epithelium
Project
28
AMP
Genome assembly (visualization)
5
GRCh38
5
hg19
Lab
22
AMP-T2D consortium
6
Kyle Gaulton, UCSD
Audit category:
2
inconsistent ontology term
Audit category:
1
missing controlled_by
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
28 results
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Clear Filters
ChIP-seq
total RNA-seq
tissue
liver
9
islet of Langerhans
6
right lobe of liver
3
in vitro differentiated cells
pancreatic endoderm
3
Hepatic endoderm
2
Posterior foregut
1
definitive endodermal cell
1
hepatocyte
1
+ See 1 more…
stem cell
hESC
1
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