Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
46
ChIP-seq
2
total RNA-seq
Assay category
46
DNA binding
2
Transcription
Target of assay
26
histone
26
histone modification
14
narrow histone mark
12
broad histone mark
11
transcription factor
9
control
2
RNA binding protein
1
chromatin remodeller
Date released
359
May, 2021
324
November, 2017
170
February, 2021
148
May, 2020
134
May, 2022
127
August, 2017
110
February, 2023
90
August, 2021
73
September, 2018
72
October, 2019
62
November, 2018
59
September, 2020
55
June, 2019
48
July, 2018
46
December, 2017
43
April, 2018
39
February, 2018
31
July, 2019
28
December, 2018
24
March, 2020
23
January, 2019
21
November, 2019
12
November, 2020
8
January, 2021
7
August, 2020
7
December, 2019
6
January, 2018
5
March, 2023
5
May, 2019
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
2
October, 2018
Available data
48
bam
48
fastq
38
bigWig
36
bed narrowPeak
15
bed bed3+
14
bigBed narrowPeak
2
tsv
Organism
48
Homo sapiens
Biosample type
tissue
43
in vitro differentiated cells
3
stem cell
2
primary cell
Organ
21
epithelium
15
liver
13
embryo
2
pancreas
Project
48
AMP
Genome assembly (visualization)
43
GRCh38
43
hg19
Lab
48
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
11
inconsistent control read length
biosample_type!
tissue
BIOSAMPLE
ASSAY
48 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
in vitro differentiated cells
hepatocyte
15
pancreatic endoderm
9
Posterior foregut
5
definitive endodermal cell
5
primitive gut cell
5
+ See 1 more…
stem cell
hESC
3
primary cell
pancreatic acinar cell
2
See all biosamples
Download