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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
168
ChIP-seq
Assay category
168
DNA binding
Target of assay
61
histone
61
histone modification
57
transcription factor
50
control
34
broad histone mark
27
narrow histone mark
15
RNA binding protein
3
chromatin remodeller
Date released
406
November, 2017
322
August, 2017
298
October, 2019
226
May, 2021
218
June, 2019
200
May, 2022
196
August, 2021
189
February, 2023
156
February, 2021
152
May, 2020
120
May, 2019
94
December, 2017
88
November, 2018
80
April, 2019
74
October, 2018
59
September, 2020
47
September, 2018
47
September, 2023
43
July, 2019
41
November, 2019
35
December, 2018
25
January, 2019
24
February, 2018
23
October, 2017
19
April, 2020
19
March, 2020
16
January, 2021
15
May, 2023
12
November, 2020
11
September, 2017
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
July, 2018
4
October, 2022
1
August, 2018
1
August, 2022
1
December, 2019
Available data
170
bam
154
fastq
119
bigWig
117
bed narrowPeak
95
bigBed narrowPeak
15
bed bed3+
tsv
Organism
168
Homo sapiens
Biosample type
122
tissue
43
in vitro differentiated cells
3
stem cell
Organ
63
liver
51
pancreas
23
adipose tissue
23
connective tissue
19
epithelium
13
embryo
Project
168
AMP
Genome assembly (visualization)
122
GRCh38
122
hg19
Lab
168
AMP-T2D consortium
Audit category:
27
inconsistent control
4
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
12
inconsistent control read length
files.file_type!
tsv
BIOSAMPLE
ASSAY
168 results
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Clear Filters
ChIP-seq
tissue
liver
38
body of pancreas
33
endocrine pancreas
16
subcutaneous adipose tissue
12
omental fat pad
11
+ See 2 more…
in vitro differentiated cells
hepatocyte
15
pancreatic endoderm
9
Posterior foregut
5
definitive endodermal cell
5
primitive gut cell
5
+ See 1 more…
stem cell
hESC
3
See all biosamples
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