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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
48
ChIP-seq
Assay category
48
DNA binding
Target of assay
transcription factor
29
histone
29
histone modification
19
control
15
broad histone mark
14
narrow histone mark
4
RNA binding protein
3
chromatin remodeller
Date released
582
February, 2021
364
August, 2017
333
May, 2020
305
August, 2021
296
May, 2021
291
October, 2019
200
May, 2022
194
February, 2023
190
June, 2019
162
July, 2018
162
November, 2017
113
May, 2019
106
July, 2019
74
April, 2019
73
September, 2018
61
October, 2018
59
September, 2020
49
April, 2018
48
December, 2017
47
March, 2020
47
September, 2023
39
February, 2018
39
November, 2019
24
February, 2020
24
November, 2018
23
October, 2017
19
April, 2020
16
January, 2019
16
January, 2021
15
May, 2023
11
September, 2017
10
November, 2020
8
December, 2019
8
January, 2018
7
August, 2020
7
December, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
2
June, 2018
1
August, 2022
Available data
48
bam
48
fastq
28
bed narrowPeak
28
bigWig
17
bigBed narrowPeak
15
bed bed3+
Organism
48
Homo sapiens
Biosample type
28
in vitro differentiated cells
17
tissue
3
stem cell
Organ
30
liver
13
epithelium
6
embryo
Project
48
AMP
Genome assembly (visualization)
33
GRCh38
33
hg19
Lab
48
AMP-T2D consortium
Audit category:
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
6
inconsistent control read length
target.investigated_as!
transcription factor
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
48 results
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Clear Filters
ChIP-seq
in vitro differentiated cells
hepatocyte
13
pancreatic endoderm
6
Posterior foregut
3
definitive endodermal cell
3
primitive gut cell
3
tissue
liver
9
right lobe of liver
8
stem cell
hESC
3
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